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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1595
candidate regulatory elements
1278
target gene predictions
929
histone modifications
863
accessible chromatin
801
binding sites
127
eQTL
123
variant allelic effects
69
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2294
February, 2021
1552
September, 2022
333
November, 2021
311
February, 2024
285
May, 2021
268
June, 2020
133
May, 2020
95
October, 2022
88
January, 2022
79
August, 2021
56
January, 2021
49
May, 2022
48
January, 2020
47
March, 2020
44
November, 2022
39
May, 2024
31
February, 2023
29
August, 2017
19
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
9
August, 2018
9
October, 2019
3
September, 2018
2
November, 2020
2
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5638
bed bed3+
tsv
bed bed9
517
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5826
Homo sapiens
Biosample type
2085
cell line
1724
primary cell
1707
tissue
352
in vitro differentiated cells
3
stem cell
Organ
585
epithelium
362
connective tissue
brain
324
kidney
290
musculature of body
240
lung
231
intestine
192
bodily fluid
188
pancreas
183
blood
182
heart
178
embryo
177
limb
173
vasculature
168
skin of body
139
large intestine
130
blood vessel
116
liver
113
extraembryonic component
98
eye
94
stomach
77
uterus
73
mammary gland
71
bone element
65
small intestine
64
prostate gland
59
adipose tissue
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
artery
51
ureter
40
gonad
38
thymus
36
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
17
lymphatic vessel
15
nerve
skeleton
14
bronchus
14
mouth
12
bone marrow
12
pituitary gland
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5447
AMP
333
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5714
hg19
894
GRCh38
4
hg18
files.file_type!
bed bed9
tsv
organ_slims!
brain
skeleton
BIOSAMPLE
TYPE
5873 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 747 more…
primary cell
monocyte
2
86
18
1
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
3
7
1
15
2
1
2
1
2
B cell
17
10
6
+ See 338 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
1
1
lung
33
17
1
muscle of arm
33
16
1
1
+ See 161 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
6
1
mesenchymal stem cell
3
3
1
1
1
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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