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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1511
candidate regulatory elements
1202
target gene predictions
943
histone modifications
767
binding sites
696
accessible chromatin
139
eQTL
99
variant allelic effects
71
chromatin state
24
gene expression
11
caQTL
7
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2258
February, 2021
1515
September, 2022
277
May, 2021
259
June, 2020
250
February, 2024
206
November, 2021
137
May, 2020
104
January, 2022
95
October, 2022
68
August, 2021
54
January, 2020
47
May, 2022
42
March, 2020
36
January, 2021
31
August, 2017
29
November, 2022
20
February, 2023
12
April, 2020
12
November, 2019
11
March, 2023
8
February, 2020
5
September, 2023
4
October, 2019
3
August, 2018
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5264
bed bed3+
bed bed9
tsv
370
bigWig
38
bigBed bed9
34
bed bed9+
30
txt
18
csv
2
bigBed narrowPeak
1
bam
Organism
5446
Homo sapiens
Biosample type
2077
cell line
1826
tissue
1246
primary cell
338
in vitro differentiated cells
4
stem cell
Organ
epithelium
354
connective tissue
333
brain
324
kidney
290
musculature of body
240
lung
231
intestine
192
bodily fluid
188
pancreas
183
blood
180
heart
178
embryo
177
limb
170
vasculature
168
skin of body
139
large intestine
130
blood vessel
114
liver
113
extraembryonic component
98
eye
94
stomach
77
uterus
73
mammary gland
71
bone element
small intestine
prostate gland
59
adipose tissue
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
artery
51
ureter
40
gonad
38
thymus
36
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
nerve
15
skeleton
14
bronchus
14
lymphatic vessel
14
mouth
12
bone marrow
12
pituitary gland
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5223
AMP
206
ENCODE
40
T1D
12
LungMap
7
community
5
ITG
Genome assembly (visualization)
5337
hg19
724
GRCh38
4
hg18
files.file_type!
bed bed9
tsv
organ_slims!
epithelium
prostate gland
small intestine
BIOSAMPLE
TYPE
5493 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 743 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
1
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
2
1
lung
33
17
1
+ See 208 more…
primary cell
monocyte
2
86
1
18
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
1
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
fibroblast
4
1
16
2
6
+ See 246 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
embryonic stem cell
1
1
1
6
mesenchymal stem cell
3
3
1
1
1
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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