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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1609
candidate regulatory elements
1323
target gene predictions
967
histone modifications
885
accessible chromatin
795
binding sites
678
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
chromatin state
71
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2518
February, 2021
1615
September, 2022
382
May, 2021
378
February, 2024
332
November, 2021
286
September, 2023
274
June, 2020
151
May, 2020
128
August, 2021
125
March, 2020
105
January, 2022
97
October, 2022
82
January, 2020
70
March, 2023
63
February, 2020
54
January, 2021
48
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5770
bed bed3+
891
tsv
bed bed9
536
bigWig
108
txt
40
bigBed bed9
33
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
xls
Organism
6867
Homo sapiens
Biosample type
2288
primary cell
2118
tissue
2073
cell line
430
in vitro differentiated cells
4
stem cell
Organ
896
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
261
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
6209
AMP
332
ENCODE
281
KPMP
58
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5934
hg19
993
GRCh38
4
hg18
files.file_type!
bed bed9
xls
organ_slims!
bone element
lymph node
spinal cord
BIOSAMPLE
TYPE
6915 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 443 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
+ See 247 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
+ See 741 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 121 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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