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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1552
candidate regulatory elements
1276
target gene predictions
929
histone modifications
860
accessible chromatin
801
binding sites
663
gene expression
167
differential activity
141
eQTL
123
variant allelic effects
69
chromatin state
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2469
February, 2021
1545
September, 2022
377
February, 2024
373
May, 2021
333
November, 2021
283
September, 2023
268
June, 2020
133
May, 2020
128
August, 2021
95
October, 2022
90
March, 2020
87
January, 2022
70
March, 2023
56
January, 2021
55
January, 2020
49
May, 2022
46
February, 2020
44
November, 2022
32
February, 2023
29
August, 2017
28
March, 2024
19
April, 2020
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5593
bed bed3+
832
tsv
bed bed9
517
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
xls
Organism
6609
Homo sapiens
Biosample type
2273
primary cell
2107
cell line
1845
tissue
426
in vitro differentiated cells
3
stem cell
Organ
896
epithelium
575
kidney
419
connective tissue
brain
304
musculature of body
261
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
vagina
5
trachea
3
nose
1
pericardium
Project
5947
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5714
hg19
912
GRCh38
4
hg18
files.file_type!
bed bed9
xls
organ_slims!
brain
skeleton
vagina
BIOSAMPLE
TYPE
6656 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 441 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
+ See 751 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 188 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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