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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1224accessible chromatin
  • 977histone modifications
  • 817binding sites
  • 673gene expression
  • 484differential activity
  • 166eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 44chromatin state
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2590February, 2021
  • 1984July, 2026
  • 1678September, 2022
  • 384May, 2021
  • 344February, 2024
  • 333November, 2021
  • 320May, 2026
  • 289June, 2020
  • 286September, 2023
  • 152May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 96October, 2022
  • 83January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 13November, 2019
  • 9August, 2018
  • 9October, 2019
  • 4August, 2017
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 8015bed bed3+
  • 3530tsv
  • bed bed9
  • 546bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 11948Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 1458ENCODE-rE2G
  • 966ENCODE
  • 607DGA
  • 533AMP
  • 421T1D
  • 404T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151GTEx
  • 141 T2DKP
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5450tissue
  • 3696primary cell
  • 2375cell line
  • 470in vitro differentiated cells
  • 3stem cell
Organ
  • 3340blood
  • 2869vasculature
  • 2833blood vessel
  • 2826bodily fluid
  • 2654vein
  • 892epithelium
  • 831brain
  • 679kidney
  • 463connective tissue
  • 442heart
  • 369lung
  • 305pancreas
  • 299intestine
  • 286musculature of body
  • 261skin of body
  • 224liver
  • 194limb
  • 190large intestine
  • 187embryo
  • 152eye
  • 141extraembryonic component
  • 133adipose tissue
  • 116stomach
  • 111muscle organ
  • 92bone element
  • 89mammary gland
  • 89uterus
  • 88adrenal gland
  • 82thymus
  • 81placenta
  • 80artery
  • 77small intestine
  • 74prostate gland
  • 60__MARKER__
  • 60ureter
  • 57spleen
  • 56gonad
  • 54lymph node
  • 54penis
  • 43thyroid gland
  • 41esophagus
  • 41spinal cord
  • 28ovary
  • 27testis
  • 21nerve
  • 21skeleton
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 17mouth
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 12bone marrow
  • 11urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11281AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6068hg19
  • 3029GRCh38
  • 4hg18
files.file_type!
  • bed bed9
lab.title!
  • Stephen Parker, UMich
BIOSAMPLE
TYPE

11996 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3837511412
stomach42403111
head of caudate nucleus86
kidney28291021711
primary cell
monocyte2188611544121
fibroblast2834011026
endothelial cell173221282521
CD8-positive, alpha-beta T cell27743031
T-cell644
cell line
HeLa-S35951
A5493321112
H1-hESC3911128
K562307112
MCF-7139123
in vitro differentiated cells
hematopoietic multipotent progenitor cell22191111
neural progenitor cell6510157
adipocyte744111
cardiomyocytes11
mesenchymal stem cell43111
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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