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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
candidate regulatory elements
56
target gene predictions
14
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
3
variant allelic effects
2
eQTL
2
gene expression
Date released
91
September, 2022
64
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
January, 2020
3
May, 2020
2
January, 2022
2
March, 2024
March, 2020
1
October, 2022
Available data
187
bed bed3+
bed bed9
6
bigWig
2
tsv
Organism
191
Homo sapiens
Biosample type
155
tissue
30
cell line
6
primary cell
Organ
893
epithelium
572
kidney
409
connective tissue
362
brain
295
musculature of body
254
pancreas
240
lung
232
intestine
222
vasculature
194
heart
193
bodily fluid
187
embryo
185
limb
184
blood
170
skin of body
165
blood vessel
140
large intestine
132
liver
113
extraembryonic component
100
eye
95
stomach
79
uterus
75
bone element
73
mammary gland
72
adipose tissue
65
prostate gland
64
small intestine
61
artery
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
41
gonad
37
esophagus
37
thymus
32
spinal cord
27
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
thyroid gland
18
nerve
18
ovary
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
1
pericardium
Project
185
AMP
6
ENCODE
Genome assembly (visualization)
187
hg19
13
GRCh38
files.file_type!
bed bed9
month_released!
January, 2018
March, 2020
BIOSAMPLE
TYPE
191 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
variant allelic effects
eQTL
gene expression
tissue
large intestine
27
14
1
1
renal pelvis
19
9
2
1
sigmoid colon
10
6
1
transverse colon
8
5
1
1
left renal pelvis
6
2
1
1
+ See 10 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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