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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1432
candidate regulatory elements
1212
target gene predictions
953
histone modifications
855
accessible chromatin
785
binding sites
655
gene expression
161
eQTL
155
differential activity
128
variant allelic effects
70
chromatin state
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2422
February, 2021
1442
September, 2022
371
May, 2021
357
February, 2024
309
November, 2021
266
June, 2020
266
September, 2023
142
May, 2020
127
August, 2021
114
March, 2020
99
January, 2022
95
October, 2022
76
January, 2020
66
March, 2023
59
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
30
August, 2017
28
February, 2023
26
March, 2024
17
April, 2020
10
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5407
bed bed3+
850
tsv
bed bed9
510
bigWig
108
txt
34
bed bed9+
32
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6457
Homo sapiens
Biosample type
2124
cell line
2115
primary cell
1840
tissue
420
in vitro differentiated cells
4
stem cell
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
blood vessel
170
skin of body
142
liver
141
large intestine
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5842
AMP
309
ENCODE
261
KPMP
60
T1D
17
LungMap
11
community
5
ITG
Genome assembly (visualization)
5570
hg19
933
GRCh38
4
hg18
files.file_type!
bed bed9
organ_slims!
blood vessel
extraembryonic component
intestine
penis
BIOSAMPLE
TYPE
6505 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
+ See 751 more…
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 411 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
+ See 225 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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