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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
target gene predictions
87
candidate regulatory elements
79
accessible chromatin
51
binding sites
49
gene expression
33
differential activity
31
histone modifications
17
eQTL
11
variant allelic effects
6
chromatin state
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
112
February, 2021
99
September, 2022
53
February, 2024
47
March, 2023
38
May, 2021
20
January, 2021
19
November, 2021
19
October, 2022
17
June, 2020
10
August, 2021
10
March, 2020
7
August, 2018
7
May, 2020
6
October, 2019
5
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
378
bed bed3+
77
tsv
58
bigWig
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
486
Homo sapiens
Biosample type
203
cell line
144
tissue
136
primary cell
3
in vitro differentiated cells
Organ
909
epithelium
575
kidney
427
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
237
vasculature
234
intestine
211
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
144
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
lymphatic vessel
22
testis
21
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
445
AMP
20
T1D
19
ENCODE
2
community
Genome assembly (visualization)
394
hg19
77
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
486 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
gene expression
differential activity
histone modifications
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
sQTL
variant to gene
cell line
K562
23
7
1
2
1
1
EndoC_BH1
1
8
8
3
1
GM12878
8
2
1
2
1
1
GM06990
1
2
1
2
1
GM19240
2
1
1
2
1
+ See 29 more…
tissue
islet of Langerhans
1
6
2
11
1
13
1
3
2
2
2
thymus
14
20
1
1
1
body of pancreas
5
8
2
1
1
3
pancreas
5
5
5
1
1
1
1
1
endocrine pancreas
4
7
+ See 9 more…
primary cell
pancreatic ductal cell
3
6
1
3
3
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 15 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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