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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
116
candidate regulatory elements
101
target gene predictions
52
binding sites
30
histone modifications
22
accessible chromatin
5
chromatin state
4
eQTL
3
gene expression
1
pQTL
Date released
120
February, 2021
115
September, 2022
31
February, 2024
20
October, 2022
19
June, 2020
9
May, 2021
6
November, 2021
5
August, 2017
3
August, 2021
3
March, 2024
2
January, 2022
1
March, 2020
Available data
327
bed bed3+
bed bed9
3
bigWig
3
tsv
Organism
334
Homo sapiens
Biosample type
210
cell line
109
tissue
15
primary cell
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
pericardium
Project
328
AMP
6
ENCODE
Genome assembly (visualization)
329
hg19
38
GRCh38
files.file_type!
bed bed9
organ_slims!
liver
pericardium
BIOSAMPLE
TYPE
334 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
chromatin state
eQTL
gene expression
pQTL
cell line
K562
7
23
2
1
1
1
GM12878
2
8
2
1
1
1
GM06990
2
1
2
1
1
GM19240
1
2
2
1
1
HAP-1
2
2
1
1
1
+ See 34 more…
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 10 more…
primary cell
colon epithelial cell
3
3
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
See all biosamples
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