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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
195
candidate regulatory elements
115
target gene predictions
28
accessible chromatin
14
binding sites
7
histone modifications
4
eQTL
4
gene expression
4
variant allelic effects
2
chromatin state
Date released
198
September, 2022
112
February, 2021
20
November, 2021
12
June, 2020
6
May, 2021
5
October, 2022
4
April, 2020
4
February, 2024
4
January, 2022
4
March, 2024
2
August, 2017
2
March, 2020
Available data
365
bed bed3+
bed bed9
16
bigWig
4
tsv
Organism
373
Homo sapiens
Biosample type
238
tissue
79
cell line
56
primary cell
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
349
AMP
20
ENCODE
4
LungMap
Genome assembly (visualization)
365
hg19
24
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
373 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
chromatin state
tissue
stomach
40
21
3
1
1
1
lung
33
17
1
1
left lung
26
13
right lung
22
11
1
testis
7
3
1
1
1
1
1
+ See 6 more…
cell line
A549
21
19
1
2
1
IMR-90
2
2
1
2
1
PC-9
2
2
1
1
1
WI38
5
1
NT2-D1 cell
1
1
1
2
+ See 5 more…
primary cell
fibroblast of lung
6
4
2
1
bronchial epithelial cell
4
2
1
2
1
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
1
type I pneumocyte
1
3
+ See 10 more…
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