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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
136
target gene predictions
88
candidate regulatory elements
86
accessible chromatin
51
gene expression
34
binding sites
27
histone modifications
22
eQTL
14
differential activity
13
variant allelic effects
7
chromatin state
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
118
February, 2021
88
September, 2022
69
February, 2024
52
November, 2021
21
June, 2020
18
May, 2021
17
September, 2023
12
October, 2022
11
August, 2021
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
May, 2020
7
November, 2022
6
January, 2020
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2019
Available data
396
bed bed3+
67
tsv
52
bigWig
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
488
Homo sapiens
Biosample type
253
primary cell
99
tissue
89
cell line
46
in vitro differentiated cells
1
stem cell
Organ
899
epithelium
575
kidney
419
connective tissue
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
410
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
412
hg19
131
GRCh38
2
hg18
files.file_type!
bed bed9
organ_slims!
brain
bronchus
BIOSAMPLE
TYPE
488 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
osteoblast
2
2
5
2
3
2
foreskin fibroblast
2
6
1
4
2
fibroblast of lung
4
6
2
1
+ See 44 more…
tissue
adipose tissue
8
7
2
3
1
4
1
subcutaneous adipose tissue
2
2
5
6
1
1
1
3
omental fat pad
2
5
2
2
2
3
uterus
2
3
1
1
1
subcutaneous abdominal adipose tissue
5
1
+ See 10 more…
cell line
HeLa-S3
55
5
1
GM23248
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
adipose tissue derived mesenchymal stem cell
1
1
+ See 8 more…
in vitro differentiated cells
adipocyte
6
4
4
1
1
1
4
mesenchymal stem cell
3
3
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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