Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 78accessible chromatin
  • 42target gene predictions
  • 18candidate regulatory elements
  • 6binding sites
  • 4histone modifications
  • 2variant allelic effects
  • 1eQTL
  • 1gene expression
Date released
  • 52July, 2026
  • 24February, 2023
  • 22November, 2022
  • 18September, 2022
  • 17February, 2021
  • 6June, 2020
  • 4November, 2021
  • 2February, 2020
  • 2January, 2020
  • 2May, 2020
  • 2October, 2022
  • 1February, 2024
Available data
  • 140bed bed3+
  • 36bigWig
  • bed bed9
  • 2tsv
Organism
  • 152Homo sapiens
Collection Tags
  • 47CMDGA
  • 41HDMA
  • 18EpiMap
  • 14ChIP-Atlas
  • 11ENCODE
  • 11ENCODE-rE2G
  • 4AMP
  • 4T2DKP
  • 2DGA
  • 1GTEx
Biosample type
  • 70tissue
  • 65primary cell
  • 11cell line
  • 6in vitro differentiated cells
Organ
  • 3342blood
  • 2870vasculature
  • 2834blood vessel
  • 2828bodily fluid
  • 2655vein
  • 902epithelium
  • 837brain
  • 679kidney
  • 477connective tissue
  • 442heart
  • 370lung
  • 315musculature of body
  • 306pancreas
  • 303intestine
  • 262skin of body
  • 226liver
  • 194limb
  • 193large intestine
  • 188embryo
  • 152eye
  • 141extraembryonic component
  • 134adipose tissue
  • 117stomach
  • 111muscle organ
  • 90bone element
  • 90mammary gland
  • 89uterus
  • 88adrenal gland
  • 82thymus
  • 81placenta
  • 80artery
  • 78small intestine
  • 74prostate gland
  • 60__MARKER__
  • 60ureter
  • 57spleen
  • 56gonad
  • 54lymph node
  • 54penis
  • 43thyroid gland
  • 41esophagus
  • 41spinal cord
  • 28ovary
  • 27testis
  • 21nerve
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 19skeleton
  • 17mouth
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 12bone marrow
  • 11urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 148AMP
  • 4ENCODE
Genome assembly (visualization)
  • 98hg19
  • 59GRCh38
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

152 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
histone modifications
variant allelic effects
eQTL
gene expression
tissue
retina236611111
pigmented layer of retina20
eye144
corneal epithelium1
primary cell
retinal pigment epithelial cell43221
iris pigment epithelial cell122
fibroblast of the conjunctiva22
amacrine cell12
retinal bipolar neuron21
cell line
WERI-Rb-113221
fibroblast of the conjunctiva1
retinal cell1
in vitro differentiated cells
retinal pigment epithelial cell6
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego