Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 202gene expression
  • 162target gene predictions
  • 159candidate regulatory elements
  • 73differential activity
  • 50accessible chromatin
  • 16variant allelic effects
  • 7binding sites
  • 6histone modifications
  • 4eQTL
Date released
  • 188February, 2021
  • 150September, 2022
  • 140September, 2023
  • 87July, 2026
  • 28August, 2021
  • 19May, 2020
  • 17May, 2026
  • 15June, 2020
  • 14January, 2020
  • 9February, 2020
  • 3March, 2020
  • 3November, 2021
  • 2March, 2024
  • 2October, 2022
  • 1February, 2024
  • 1January, 2022
Available data
  • 398bed bed3+
  • 251tsv
  • 87txt
  • bed bed9
  • 36bigWig
  • 2bigBed bed9
Organism
  • 679Homo sapiens
Collection Tags
  • 150EpiMap
  • 146DGA
  • 140KPMP
  • 91ENCODE
  • 87ENCODE-rE2G
  • 26ChIP-Atlas
  • 17pyxis
  • 3AMP
  • 3T2DKP
  • 2GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 326primary cell
  • 310tissue
  • 41cell line
  • 2in vitro differentiated cells
Organ
  • 3342blood
  • 2870vasculature
  • 2834blood vessel
  • 2828bodily fluid
  • 2655vein
  • 902epithelium
  • 837brain
  • 679kidney
  • 477connective tissue
  • 442heart
  • 370lung
  • 315musculature of body
  • 306pancreas
  • 303intestine
  • 262skin of body
  • 226liver
  • 194limb
  • 193large intestine
  • 188embryo
  • 152eye
  • 141extraembryonic component
  • 134adipose tissue
  • 117stomach
  • 111muscle organ
  • 92bone element
  • 90mammary gland
  • 89uterus
  • 88adrenal gland
  • 82thymus
  • 81placenta
  • 80artery
  • 78small intestine
  • 74prostate gland
  • 60__MARKER__
  • 60ureter
  • 57spleen
  • 56gonad
  • 54lymph node
  • 54penis
  • 43thyroid gland
  • 41esophagus
  • 41spinal cord
  • 28ovary
  • 27testis
  • 21nerve
  • 21skeleton
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 17mouth
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 12bone marrow
  • 11urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 536AMP
  • 140KPMP
  • 3ENCODE
Genome assembly (visualization)
  • 310hg19
  • 115GRCh38
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

679 results

search-icontable-tab-icon
Clear Filters
gene expression
target gene predictions
candidate regulatory elements
differential activity
accessible chromatin
variant allelic effects
binding sites
histone modifications
eQTL
primary cell
epithelial cell of proximal tubule16222111
glomerular endothelial cell142221
glomerular visceral epithelial cell5222
kidney tubule cell1432
kidney glomerular epithelial cell12221
tissue
kidney72829101121
renal cortex interstitium202011
right kidney202011
renal pelvis191921
left kidney1818
cell line
HEK29313121
ACHN221
Caki2221
RCC 7860221
G40122
in vitro differentiated cells
nephron progenitor cell1
renal cell carcinoma1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego