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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
91
candidate regulatory elements
57
target gene predictions
14
accessible chromatin
11
binding sites
6
histone modifications
4
chromatin state
4
eQTL
4
gene expression
3
Fine-mapped variants
1
variant allelic effects
Date released
85
September, 2022
62
February, 2021
10
June, 2020
7
May, 2021
6
November, 2021
5
March, 2020
4
August, 2017
3
February, 2024
3
January, 2022
3
March, 2024
3
October, 2022
2
May, 2020
1
February, 2020
1
January, 2020
Available data
183
bed bed3+
bed bed9
8
tsv
4
bigWig
2
bigBed bed9
Organism
195
Homo sapiens
Biosample type
135
tissue
35
cell line
25
primary cell
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
vagina
5
trachea
3
nose
1
pericardium
Project
189
AMP
6
ENCODE
Genome assembly (visualization)
187
hg19
16
GRCh38
files.file_type!
bed bed9
organ_slims!
vagina
BIOSAMPLE
TYPE
195 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
Fine-mapped variants
variant allelic effects
tissue
large intestine
27
14
1
1
spinal cord
14
8
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
1
+ See 10 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 5 more…
primary cell
endothelial cell of umbilical vein
6
4
2
2
1
1
colon epithelial cell
3
3
astrocyte of the spinal cord
2
1
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