Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 146candidate regulatory elements
  • 80target gene predictions
  • 31accessible chromatin
  • 11eQTL
  • 11gene expression
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 6Fine-mapped variants
  • 6caQTL
  • 3chromatin state
Date released
  • 136September, 2022
  • 92February, 2021
  • 14February, 2024
  • 12July, 2025
  • 11November, 2021
  • 9March, 2020
  • 6February, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5May, 2020
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 1August, 2021
  • 1January, 2022
Available data
  • 284bed bed3+
  • bed bed9
  • 21tsv
  • 16bigWig
  • 4bed bed3
  • 4bed narrowPeak
  • 3bigBed bed9
Organism
  • 315Homo sapiens
Collection Tags
  • 136EpiMap
  • 79ENCODE
  • 32DGA
  • 30 T2DKP
  • 19ChIP-Atlas
  • 17T2DKP
  • 13AMP
  • 12GTEx
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 240tissue
  • 59primary cell
  • 14cell line
  • 2in vitro differentiated cells
Organ
  • 2873vasculature
  • 2828bodily fluid
  • 2819blood
  • 2813blood vessel
  • 2654vein
  • 911epithelium
  • 575kidney
  • 429connective tissue
  • 401brain
  • 315musculature of body
  • 264pancreas
  • 241lung
  • 234intestine
  • 213heart
  • 194limb
  • 188embryo
  • 170skin of body
  • 143liver
  • 141large intestine
  • 113extraembryonic component
  • 100eye
  • 96stomach
  • 79adipose tissue
  • 79uterus
  • 75bone element
  • 73mammary gland
  • 67artery
  • 65prostate gland
  • 65small intestine
  • 59adrenal gland
  • 57placenta
  • 54lymph node
  • 54penis
  • 51ureter
  • 42gonad
  • 38esophagus
  • 38thymus
  • 35spinal cord
  • 28spleen
  • 22lymphatic vessel
  • 22testis
  • 21nerve
  • 19lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 15mouth
  • 15skeleton
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 11breast
  • 8tongue
  • 8urinary bladder
  • 8vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 304AMP
  • 11ENCODE
Genome assembly (visualization)
  • 296hg19
  • 29GRCh38
Encyclopedia version
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

315 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
eQTL
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
chromatin state
tissue
muscle of arm331611
muscle of leg27142
muscle of back2813
psoas muscle781
gastrocnemius medialis851
primary cell
skeletal muscle satellite cell226121
skeletal muscle fiber522
type I muscle cell13111
type II muscle cell13111
skeletal muscle cell2111
cell line
LHCN-M221111
A67322
SJCRH30211
in vitro differentiated cells
myotube11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego