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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 913accessible chromatin
  • 876candidate regulatory elements
  • 817binding sites
  • 524target gene predictions
  • 186eQTL
  • 141variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 75chromatin state
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2413February, 2021
  • 333November, 2021
  • 312February, 2024
  • 294May, 2021
  • 289June, 2020
  • 152May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 75August, 2021
  • 66January, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 26February, 2020
  • 19April, 2020
  • 15March, 2023
  • 13November, 2019
  • 13September, 2022
  • 9October, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 4414bed bed3+
  • 2903tsv
  • bed bed9
  • 546bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7365Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 938ENCODE
  • 433DGA
  • 424AMP
  • 401T2DKP
  • 327T1D
  • 181BLUEPRINT
  • 1744DN
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 3805tissue
  • 1794cell line
  • 1522primary cell
  • 286in vitro differentiated cells
  • 4stem cell
Organ
  • 2798vasculature
  • 2782bodily fluid
  • 2778blood
  • 2759blood vessel
  • 2649vein
  • 541epithelium
  • 304connective tissue
  • 262brain
  • 223kidney
  • 162musculature of body
  • 158pancreas
  • 124embryo
  • 121intestine
  • 118heart
  • 102liver
  • 100lung
  • 100skin of body
  • 97limb
  • 81eye
  • 73large intestine
  • 69uterus
  • 62adipose tissue
  • 51artery
  • 48stomach
  • 47extraembryonic component
  • 45mammary gland
  • 43bone element
  • 38lymph node
  • 38prostate gland
  • 34penis
  • 30adrenal gland
  • 27small intestine
  • 25placenta
  • 25ureter
  • 24gonad
  • 22esophagus
  • 18spinal cord
  • 16thymus
  • 15lymphatic vessel
  • 15spleen
  • 13nerve
  • 13testis
  • 12pituitary gland
  • 10bone marrow
  • 10bronchus
  • 10ovary
  • 10thyroid gland
  • 9skeleton
  • 8lymphoid tissue
  • 6breast
  • 6mouth
  • 5trachea
  • 3tongue
  • 3urinary bladder
  • 3vagina
  • 1nose
Project
  • 6873AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4451hg19
  • 1045GRCh38
  • 4hg18
files.file_type!
  • bed bed9
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7413 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
target gene predictions
eQTL
variant allelic effects
differential activity
Fine-mapped variants
chromatin state
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
islet of Langerhans16211112322
liver24613821211
kidney21015111
retina1233111
cell line
HeLa-S32152
H1-hESC11238
K5621112171
breast cancer cell119
HFFc619
primary cell
monocyte8618124121
CD8-positive, alpha-beta T cell304751
endothelial cell115327122
fibroblast1631426
macrophage12339311
in vitro differentiated cells
neural progenitor cell151011
adipocyte142144
hematopoietic multipotent progenitor cell1191
embryonic stem cell1611
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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