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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
89
total RNA-seq
3
WGBS
2
RRBS
1
DNase-seq
Assay category
115
DNA binding
89
Transcription
5
DNA methylation
1
DNA accessibility
Target of assay
61
histone
61
histone modification
43
control
33
broad histone mark
28
narrow histone mark
11
transcription factor
1
RNA binding protein
Date released
314
May, 2020
306
February, 2021
266
May, 2021
212
August, 2021
210
August, 2017
168
July, 2018
162
May, 2022
139
February, 2023
124
October, 2019
93
November, 2017
66
July, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
27
September, 2018
24
November, 2019
23
February, 2018
23
February, 2020
23
May, 2019
22
December, 2017
18
April, 2020
16
January, 2021
15
April, 2019
14
May, 2023
14
November, 2020
13
October, 2018
11
October, 2017
10
December, 2019
9
January, 2019
8
June, 2019
8
November, 2018
7
August, 2020
7
January, 2018
6
September, 2017
5
December, 2018
5
March, 2019
3
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
1
March, 2023
Available data
262
fastq
258
bam
249
bigWig
bed narrowPeak
89
tsv
70
tagAlign
34
bed broadPeak
34
bigBed narrowPeak
29
bed bed3+
15
bigBed broadPeak
bed bedMethyl
4
bigBed bedMethyl
Organism
210
Homo sapiens
Biosample type
160
tissue
25
in vitro differentiated cells
25
primary cell
Organ
138
pancreas
77
connective tissue
adipose tissue
35
liver
12
epithelium
11
musculature of body
Project
210
AMP
Genome assembly (visualization)
118
hg19
117
GRCh38
Lab
210
AMP-T2D consortium
Audit category:
26
missing controlled_by
files.file_type!
bed bedMethyl
bed narrowPeak
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
210 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
tissue
islet of Langerhans
24
89
liver
31
3
skeletal muscle tissue
9
2
pancreas
1
right lobe of liver
1
in vitro differentiated cells
adipocyte
25
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
1
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