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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
1
DNase-seq
1
pCHi-C
Assay category
20
DNA binding
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
7
November, 2018
1
March, 2020
October, 2017
Available data
23
bam
23
fastq
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
22
Homo sapiens
Biosample type
22
tissue
Organ
916
pancreas
725
liver
680
connective tissue
488
adipose tissue
480
epithelium
385
heart
350
kidney
268
brain
234
vasculature
229
blood vessel
159
bone element
141
artery
121
limb
92
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
24
embryo
22
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
22
AMP-T2D consortium
files.file_type!
bed bedMethyl
month_released!
December, 2017
October, 2017
September, 2020
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
DNase-seq
pCHi-C
tissue
spleen
20
1
1
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