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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
ChIP-seq
7
WGBS
3
ATAC-seq
1
DNase-seq
Assay category
98
DNA binding
7
DNA methylation
4
DNA accessibility
Target of assay
65
histone modification
64
histone
39
broad histone mark
25
narrow histone mark
17
control
16
transcription factor
Date released
389
February, 2021
315
November, 2017
194
May, 2020
108
August, 2017
63
December, 2017
53
November, 2018
40
May, 2022
36
August, 2021
23
October, 2018
21
July, 2019
8
October, 2019
5
December, 2019
5
January, 2019
4
March, 2020
3
February, 2020
3
June, 2019
1
August, 2018
1
December, 2018
1
February, 2023
1
January, 2018
1
May, 2023
1
November, 2019
1
October, 2017
Available data
46
fastq
43
bam
36
bigWig
28
tagAlign
21
bed narrowPeak
8
bigBed narrowPeak
7
bed bed3+
bed bedMethyl
3
bigBed bedMethyl
1
bed broadPeak
Organism
109
Homo sapiens
Biosample type
109
tissue
Organ
188
pancreas
124
connective tissue
56
adipose tissue
53
liver
29
epithelium
25
musculature of body
1
blood
1
bodily fluid
1
embryo
Project
109
AMP
Genome assembly (visualization)
35
hg19
33
GRCh38
Lab
109
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
109 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
liver
48
3
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
12
adipose tissue
2
1
1
right lobe of liver
1
1
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