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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
3
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
48
DNA binding
3
DNA methylation
2
DNA accessibility
Target of assay
33
histone modification
32
histone
19
broad histone mark
13
narrow histone mark
11
control
4
transcription factor
Date released
315
November, 2017
194
May, 2020
63
December, 2017
53
August, 2017
52
November, 2018
40
May, 2022
35
August, 2021
9
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
28
fastq
26
bam
20
tagAlign
18
bed narrowPeak
18
bigWig
6
bigBed narrowPeak
3
bed bed3+
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
53
tissue
Organ
188
pancreas
123
connective tissue
55
adipose tissue
53
liver
29
epithelium
musculature of body
Project
53
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
53
AMP-T2D consortium
Audit category:
1
inconsistent control read length
files.file_type!
bed bedMethyl
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
liver
48
3
right lobe of liver
1
1
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