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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
5
total RNA-seq
Assay category
84
DNA binding
5
Transcription
Target of assay
56
transcription factor
38
histone
38
histone modification
control
19
broad histone mark
19
narrow histone mark
RNA binding protein
9
chromatin remodeller
Date released
712
February, 2021
385
May, 2021
347
August, 2017
318
May, 2020
306
August, 2021
298
November, 2017
275
October, 2019
206
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
92
May, 2019
82
July, 2019
73
September, 2018
69
December, 2017
64
March, 2020
62
April, 2019
59
September, 2020
58
November, 2019
54
November, 2018
49
April, 2018
47
September, 2023
36
October, 2018
35
May, 2024
31
February, 2018
29
December, 2018
25
February, 2020
20
January, 2019
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
89
bam
89
fastq
88
bigWig
83
bed narrowPeak
61
bigBed narrowPeak
10
bed bed3+
5
tsv
Organism
89
Homo sapiens
Biosample type
40
tissue
33
in vitro differentiated cells
14
cell line
2
stem cell
Organ
51
liver
14
epithelium
9
blood
9
bodily fluid
9
embryo
6
spleen
Project
89
AMP
Genome assembly (visualization)
88
GRCh38
88
hg19
Lab
89
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
files.file_type!
bed bedMethyl
target.investigated_as!
RNA binding protein
control
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
28
right lobe of liver
6
spleen
6
in vitro differentiated cells
hepatocyte
12
pancreatic endoderm
7
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
+ See 1 more…
cell line
GM12878
9
HepG2
5
stem cell
hESC
2
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