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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
total RNA-seq
63
ChIP-seq
48
single cell RNA-seq
Assay category
170
Transcription
63
DNA binding
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
RNA binding protein
11
narrow histone mark
Date released
649
February, 2021
397
August, 2017
394
May, 2021
367
November, 2017
341
May, 2020
312
August, 2021
267
October, 2019
209
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
90
December, 2017
76
April, 2019
75
July, 2019
73
September, 2018
68
May, 2019
65
October, 2018
60
March, 2020
60
November, 2018
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
24
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
229
bam
200
bigWig
166
tsv
99
fastq
34
bed narrowPeak
34
bigBed narrowPeak
Organism
233
Homo sapiens
Biosample type
183
tissue
50
primary cell
Organ
204
pancreas
35
epithelium
20
connective tissue
18
adipose tissue
Project
233
AMP
Genome assembly (visualization)
200
GRCh38
200
hg19
Lab
233
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
inconsistent control read length
files.file_type!
bed bedMethyl
organ_slims!
blood vessel
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
233 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
tissue
islet of Langerhans
120
body of pancreas
28
endocrine pancreas
16
subcutaneous adipose tissue
10
omental fat pad
8
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primary cell
pancreatic beta cell
9
pancreatic acinar cell
2
5
pancreatic alpha cell
7
pancreatic delta cell
4
pancreatic cell
3
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