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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
total RNA-seq
3
small RNA-seq
1
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
20
Transcription
2
DNA accessibility
1
3D chromatin structure
Date released
455
February, 2021
123
August, 2017
23
October, 2018
18
June, 2019
17
July, 2019
14
February, 2023
6
November, 2020
5
August, 2021
5
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
22
bam
22
bigWig
20
tsv
2
bed bed3+
2
bed narrowPeak
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
1
hdf5
Organism
23
Homo sapiens
Biosample type
13
primary cell
10
tissue
Organ
23
connective tissue
17
heart
16
brain
14
pancreas
13
epithelium
12
adipose tissue
10
blood vessel
10
vasculature
9
liver
8
musculature of body
7
kidney
4
limb
3
artery
1
pericardium
0
skin of body
Project
23
AMP
Genome assembly (visualization)
23
hg19
22
GRCh38
Lab
23
AMP-T2D consortium
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
23 results
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total RNA-seq
small RNA-seq
ATAC-seq
DNase-seq
Hi-C
primary cell
osteoblast
4
1
1
mesenchymal stem cell of adipose
1
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
+ See 2 more…
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
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