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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
2
ATAC-seq
2
Hi-C
2
WGBS
1
RRBS
Assay category
5
Transcription
3
DNA methylation
2
3D chromatin structure
2
DNA accessibility
Date released
64
February, 2021
40
October, 2019
39
May, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
4
March, 2020
4
November, 2017
3
February, 2020
Available data
10
bigWig
9
bam
5
tsv
2
bed bed3+
2
bed bedMethyl
2
bed narrowPeak
2
bigBed bedMethyl
2
hdf5
Organism
12
Homo sapiens
Biosample type
7
tissue
5
primary cell
Organ
25
heart
18
connective tissue
15
brain
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
12
AMP
Genome assembly (visualization)
10
hg19
8
GRCh38
Lab
12
AMP-T2D consortium
files.file_type!
bed bedgraph
lab.title!
Xin Sun, UCSD
target.investigated_as!
control
BIOSAMPLE
ASSAY
12 results
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Clear Filters
total RNA-seq
ATAC-seq
Hi-C
WGBS
RRBS
tissue
thoracic aorta
2
1
aorta
2
ascending aorta
1
coronary artery
1
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
smooth muscle cell of the coronary artery
1
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