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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
77
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
70
histone
70
histone modification
43
broad histone mark
27
narrow histone mark
control
7
transcription factor
5
RNA binding protein
Date released
708
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
271
October, 2019
210
June, 2019
202
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
63
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
122
bam
102
bed narrowPeak
96
bigWig
64
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
125
Homo sapiens
Biosample type
106
tissue
14
cell line
5
in vitro differentiated cells
Organ
53
pancreas
47
heart
19
kidney
14
epithelium
1
adipose tissue
1
connective tissue
Project
125
AMP
Genome assembly (visualization)
124
hg19
121
GRCh38
Lab
125
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
files.file_type!
bed bedgraph
organ_slims!
gonad
target.investigated_as!
control
BIOSAMPLE
ASSAY
125 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
29
kidney
19
heart right ventricle
11
heart
7
+ See 1 more…
cell line
EndoC_BH1
11
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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