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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
3
single cell RNA-seq
1
Hi-C
Assay category
4
DNA accessibility
3
Transcription
1
3D chromatin structure
Date released
711
February, 2021
411
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
315
November, 2017
224
October, 2019
201
February, 2023
200
May, 2022
188
June, 2019
168
July, 2018
94
December, 2017
92
May, 2019
90
July, 2019
86
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
February, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
4
bam
4
fastq
3
bigWig
3
tsv
1
bed broadPeak
1
bedpe
1
hic
Organism
8
Homo sapiens
Biosample type
5
tissue
3
primary cell
Organ
6
pancreas
1
epithelium
Project
8
AMP
Genome assembly (visualization)
6
hg19
5
GRCh38
Lab
3
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
bed bedgraph
organ_slims!
brain
gonad
BIOSAMPLE
ASSAY
8 results
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Clear Filters
ATAC-seq
single cell RNA-seq
Hi-C
tissue
islet of Langerhans
4
1
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
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