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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
ATAC-seq
1
DNase-seq
1
Hi-C
1
total RNA-seq
Assay category
13
DNA binding
3
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
483
February, 2021
154
August, 2017
80
May, 2022
66
February, 2023
61
September, 2018
39
October, 2019
38
June, 2019
35
April, 2018
35
July, 2018
31
July, 2019
28
May, 2021
25
October, 2018
19
December, 2017
19
September, 2020
17
November, 2019
12
November, 2020
11
August, 2021
8
March, 2020
7
August, 2020
6
December, 2019
6
November, 2017
5
May, 2019
5
September, 2017
4
August, 2018
3
October, 2022
2
February, 2020
1
January, 2018
1
June, 2018
1
May, 2023
1
November, 2018
1
October, 2017
Available data
17
bam
14
bed narrowPeak
13
bigWig
1
bed bed3+
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
1
bigBed narrowPeak
1
fastq
1
hic
1
tsv
Organism
18
Homo sapiens
Biosample type
16
cell line
2
tissue
Organ
62
pancreas
53
liver
16
epithelium
15
blood
15
bodily fluid
9
spleen
2
adipose tissue
2
brain
2
connective tissue
Project
18
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
files.file_type!
bed bedgraph
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
13
1
1
1
tissue
adipose tissue(adipose white tissue)
1
omental fat pad
1
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