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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
single cell RNA-seq
3
ATAC-seq
1
Hi-C
Assay category
49
Transcription
3
DNA accessibility
1
3D chromatin structure
Date released
707
February, 2021
322
August, 2017
309
May, 2021
295
August, 2021
291
May, 2020
275
November, 2017
256
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
50
bam
49
bigWig
49
tsv
45
fastq
bed broadPeak
1
bedpe
1
hic
Organism
53
Homo sapiens
Biosample type
43
primary cell
10
tissue
Organ
43
pancreas
33
epithelium
2
connective tissue
Project
53
AMP
Genome assembly (visualization)
52
hg19
51
GRCh38
Lab
49
AMP-T2D consortium
2
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
files.file_type!
bed broadPeak
tagAlign
month_released!
October, 2018
BIOSAMPLE
ASSAY
53 results
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Clear Filters
single cell RNA-seq
ATAC-seq
Hi-C
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
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tissue
islet of Langerhans
6
3
1
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