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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
Hi-C
3
ChIP-seq
2
ATAC-seq
2
pCHi-C
2
total RNA-seq
Assay category
9
3D chromatin structure
3
DNA binding
2
DNA accessibility
2
Transcription
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
283
October, 2019
227
August, 2017
226
May, 2021
189
February, 2023
170
August, 2021
160
May, 2022
153
February, 2021
120
May, 2019
102
May, 2020
80
April, 2019
November, 2017
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
41
November, 2019
40
July, 2019
40
May, 2024
34
December, 2018
31
December, 2017
31
June, 2019
29
November, 2018
25
January, 2019
24
February, 2018
19
April, 2020
19
October, 2017
18
March, 2020
16
January, 2021
15
May, 2023
11
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
tsv
19
bigWig
15
bam
11
bedpe bed3+
9
hic
3
bed narrowPeak
2
ibed
Organism
18
Homo sapiens
Biosample type
11
tissue
4
in vitro differentiated cells
2
cell line
1
primary cell
Organ
8
pancreas
3
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
liver
1
vein
Project
13
AMP
5
T1D
Genome assembly (visualization)
16
hg19
3
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
bed broadPeak
tsv
month_released!
November, 2017
organ_slims!
liver
BIOSAMPLE
ASSAY
18 results
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Clear Filters
Hi-C
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
tissue
islet of Langerhans
2
1
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 1 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
1
primary cell
endothelial cell of umbilical vein
1
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