Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
87
histone
87
histone modification
45
narrow histone mark
42
broad histone mark
28
control
7
transcription factor
6
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
11
September, 2018
9
October, 2019
8
August, 2017
5
December, 2017
4
November, 2019
2
August, 2021
2
June, 2019
2
May, 2021
1
March, 2020
1
May, 2019
Available data
47
bam
46
bed narrowPeak
46
bigWig
26
fastq
15
bigBed narrowPeak
3
tagAlign
2
bed bed3+
bed broadPeak
2
bigBed broadPeak
Organism
45
Homo sapiens
Biosample type
33
primary cell
6
cell line
6
in vitro differentiated cells
Organ
109
brain
69
pancreas
54
liver
47
epithelium
40
heart
32
connective tissue
24
blood vessel
24
vasculature
15
kidney
15
limb
11
adipose tissue
embryo
8
musculature of body
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
43
AMP
2
T1D
Genome assembly (visualization)
44
GRCh38
44
hg19
Lab
45
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
4
inconsistent control read length
files.file_type!
bed broadPeak
zippedFastqFolder
organ_slims!
embryo
BIOSAMPLE
ASSAY
45 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
pancreatic alpha cell
4
+ See 4 more…
cell line
EndoC_BH1
6
in vitro differentiated cells
hepatocyte
5
pancreatic PP cell
1
See all biosamples
Download