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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
33
DNA binding
9
DNA accessibility
Target of assay
26
transcription factor
8
RNA binding protein
8
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
December, 2018
18
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
33
bam
33
fastq
28
bigWig
27
bed narrowPeak
27
bigBed narrowPeak
Organism
42
Homo sapiens
Biosample type
34
cell line
8
primary cell
Organ
768
pancreas
727
liver
672
connective tissue
488
adipose tissue
469
epithelium
363
heart
276
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
57
eye
50
musculature of body
42
blood
42
bodily fluid
41
nerve
37
embryo
20
lung
18
vein
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
34
AMP
8
T1D
Genome assembly (visualization)
28
hg19
27
GRCh38
Lab
34
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
bed broadPeak
month_released!
December, 2018
July, 2018
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
33
1
primary cell
peripheral blood mononuclear cell
8
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