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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 257ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 6RRBS
  • 5ATAC-seq
  • 3DNase-seq
  • 1FAIRE-seq
Assay category
  • 257DNA binding
  • 89Transcription
  • 15DNA methylation
  • 9DNA accessibility
Target of assay
  • 162histone modification
  • 161histone
  • 87broad histone mark
  • 73narrow histone mark
  • 50control
  • 45transcription factor
  • 6RNA binding protein
  • 2chromatin remodeller
Date released
  • 715February, 2021
  • 399May, 2021
  • 370August, 2017
  • 341May, 2020
  • 336November, 2017
  • 319August, 2021
  • 305October, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 80April, 2019
  • 79November, 2018
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 31June, 2019
  • 30January, 2019
  • 25February, 2020
  • 19April, 2020
  • 19October, 2017
  • 16January, 2021
  • 15May, 2023
  • 15November, 2020
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2023
  • 4August, 2018
  • 4March, 2019
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 287fastq
  • 282bam
  • 272bigWig
  • 142bed narrowPeak
  • 89tsv
  • 85tagAlign
  • 42bigBed narrowPeak
  • bed broadPeak
  • 33bed bed3+
  • 15bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 369Homo sapiens
Biosample type
  • 258tissue
  • 67in vitro differentiated cells
  • 45primary cell
Organ
  • 176pancreas
  • 123connective tissue
  • 56adipose tissue
  • 54liver
  • 29epithelium
  • 13musculature of body
Project
  • 370AMP
Genome assembly (visualization)
  • 235hg19
  • 230GRCh38
Lab
  • 370AMP-T2D consortium
Audit category:
  • 39missing controlled_by
Audit category:
  • 16inconsistent control read length
  • 1inconsistent assembly
  • 1inconsistent control run_type
files.file_type!
  • bed broadPeak
BIOSAMPLE
ASSAY

370 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans368911
liver4831
subcutaneous abdominal adipose tissue353
skeletal muscle tissue94
white adipose tissue12
in vitro differentiated cells
adipocyte67
primary cell
pancreatic alpha cell131
pancreatic beta cell131
pancreatic endocrine cell12
skeletal muscle myoblast211
pancreatic acinar cell1
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