Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
7
WGBS
4
single cell RNA-seq
1
FAIRE-seq
1
pCHi-C
Assay category
55
DNA binding
7
DNA methylation
4
Transcription
1
DNA accessibility
Target of assay
52
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
3
control
3
other context
3
other post-translational modification
Date released
715
February, 2021
399
May, 2021
370
August, 2017
341
May, 2020
336
November, 2017
319
August, 2021
305
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
64
November, 2018
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
31
June, 2019
25
February, 2020
19
April, 2020
19
October, 2017
15
May, 2023
15
November, 2020
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
77
fastq
75
bam
71
bigWig
61
bed narrowPeak
61
bigBed narrowPeak
9
bed bed3+
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
3
tsv
1
bedpe bed3+
1
csv
Organism
68
Homo sapiens
Biosample type
46
cell line
17
tissue
4
primary cell
1
in vitro differentiated cells
Organ
50
liver
15
blood
bodily fluid
8
pancreas
8
spleen
3
epithelium
1
adipose tissue
1
connective tissue
Project
68
AMP
Genome assembly (visualization)
61
GRCh38
53
hg19
Lab
68
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
68 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
single cell RNA-seq
FAIRE-seq
pCHi-C
cell line
HepG2
45
1
tissue
spleen
6
2
liver
4
pancreas
2
1
body of pancreas
2
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
pancreatic cell
1
in vitro differentiated cells
white fat cell
1
Download