Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
48
single cell RNA-seq
12
ChIP-seq
7
ATAC-seq
Assay category
168
Transcription
12
DNA binding
7
DNA accessibility
Target of assay
9
histone
9
histone modification
8
broad histone mark
3
control
1
narrow histone mark
Date released
710
February, 2021
383
May, 2021
341
May, 2020
325
August, 2017
308
August, 2021
298
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
139
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
64
March, 2020
61
October, 2018
60
November, 2019
59
September, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
27
June, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
179
bam
178
bigWig
164
tsv
67
fastq
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
bed broadPeak
Organism
187
Homo sapiens
Biosample type
139
tissue
48
primary cell
Organ
161
pancreas
33
epithelium
13
brain
3
connective tissue
1
adipose tissue
1
spleen
Project
187
AMP
Genome assembly (visualization)
174
GRCh38
173
hg19
Lab
187
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
2
missing controlled_by
files.file_type!
bed broadPeak
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
187 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
120
brain
12
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
+ See 1 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
See all biosamples
Download