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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
3
WGBS
1
single cell RNA-seq
Assay category
70
DNA binding
3
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
683
February, 2021
314
May, 2020
311
November, 2017
304
August, 2021
May, 2021
151
August, 2017
150
October, 2019
149
February, 2023
102
July, 2019
96
May, 2022
85
May, 2019
78
December, 2017
74
November, 2018
57
April, 2019
50
March, 2020
47
September, 2023
40
September, 2020
35
December, 2018
31
February, 2018
27
January, 2019
25
May, 2024
24
February, 2020
23
October, 2018
20
June, 2019
19
April, 2020
15
May, 2023
14
October, 2017
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
5
March, 2023
5
November, 2020
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
81
fastq
80
bam
73
bigWig
70
bed narrowPeak
70
bigBed narrowPeak
7
bed bed3+
bed broadPeak
7
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
csv
Organism
74
Homo sapiens
Biosample type
61
cell line
12
tissue
1
primary cell
Organ
50
liver
15
blood
15
bodily fluid
8
spleen
pancreas
Project
74
AMP
Genome assembly (visualization)
66
GRCh38
61
hg19
Lab
74
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
month_released!
May, 2021
organ_slims!
pancreas
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
WGBS
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
2
liver
4
primary cell
pancreatic cell
1
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