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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
6
total RNA-seq
3
DNase-seq
Assay category
18
DNA binding
6
Transcription
3
DNA accessibility
Target of assay
8
histone
8
histone modification
7
recombinant protein
7
transcription factor
6
control
5
narrow histone mark
broad histone mark
Date released
130
August, 2021
September, 2023
27
October, 2019
14
May, 2023
13
April, 2019
11
July, 2019
8
February, 2021
3
December, 2019
3
June, 2019
3
May, 2019
2
March, 2020
Available data
25
bam
19
bigWig
13
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
27
Homo sapiens
Biosample type
15
cell line
8
primary cell
4
tissue
Organ
83
brain
35
limb
27
kidney
24
nerve
21
epithelium
21
eye
20
blood vessel
20
vasculature
13
pancreas
10
artery
10
vein
5
heart
4
connective tissue
4
gonad
4
liver
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
27
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
27
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
files.file_type!
bed broadPeak
month_released!
September, 2023
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
1
primary cell
epithelial cell of proximal tubule
4
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
tissue
kidney
4
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