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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
2
pCHi-C
1
ATAC-seq
Assay category
20
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
8
November, 2018
7
December, 2018
7
January, 2019
2
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
1
bed bed3+
bed broadPeak
1
bigBed broadPeak
Organism
25
Homo sapiens
Biosample type
25
tissue
Organ
925
pancreas
728
liver
674
connective tissue
502
epithelium
488
adipose tissue
363
heart
276
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
57
eye
50
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
25
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
25
AMP-T2D consortium
files.file_type!
bed broadPeak
organ_slims!
gonad
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
WGBS
pCHi-C
ATAC-seq
tissue
spleen
20
2
1
1
small intestine
1
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