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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 105ChIP-seq
Assay category
  • 105DNA binding
Target of assay
  • 952histone modification
  • 951histone
  • 485narrow histone mark
  • 465broad histone mark
  • 465transcription factor
  • 343control
  • 105RNA binding protein
  • 89recombinant protein
  • 31chromatin remodeller
  • 5nucleotide modification
  • 4other context
  • 4other post-translational modification
Date released
  • 30November, 2017
  • 21November, 2018
  • 11October, 2018
  • 6August, 2017
  • 6January, 2019
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4December, 2017
  • 4June, 2019
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 106bigWig
  • 105bed narrowPeak
  • 103bam
  • 93bigBed narrowPeak
  • 89fastq
  • bed broadPeak
  • 9bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 105Homo sapiens
Biosample type
  • 61cell line
  • 28tissue
  • 11in vitro differentiated cells
  • 5primary cell
Organ
  • 54liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 10connective tissue
  • 9pancreas
  • 6epithelium
  • 5adipose tissue
  • 3blood vessel
  • 3kidney
  • 3vasculature
  • 1artery
  • 1eye
Project
  • 105AMP
Genome assembly (visualization)
  • 93GRCh38
  • 91hg19
Lab
  • 94AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 3missing controlled_by
Audit category:
  • 4inconsistent control read length
  • 3inconsistent control run_type
files.file_type!
  • bed broadPeak
BIOSAMPLE
ASSAY

105 results

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Clear Filters
ChIP-seq
cell line
HepG250
GM1287810
EndoC_BH11
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
islet of Langerhans2
in vitro differentiated cells
embryonic stem cell5
adipocyte4
hepatocyte2
primary cell
cardiac fibroblast1
cardiac muscle cell1
epithelial cell of proximal tubule1
kidney epithelial cell1
retinal pigment epithelial cell1
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