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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 31ChIP-seq
Assay category
  • 31DNA binding
Target of assay
  • 952histone modification
  • 951histone
  • 485narrow histone mark
  • 465broad histone mark
  • 465transcription factor
  • 343control
  • 105RNA binding protein
  • 89recombinant protein
  • 31chromatin remodeller
  • 5nucleotide modification
  • 4other context
  • 4other post-translational modification
Date released
  • 11November, 2017
  • 7November, 2018
  • 6January, 2019
  • 3December, 2017
  • 2August, 2017
  • 2December, 2018
Available data
  • 36bam
  • 36bed narrowPeak
  • 36bigWig
  • 36fastq
  • 34bigBed narrowPeak
  • bed broadPeak
  • 5bigBed broadPeak
Organism
  • 31Homo sapiens
Biosample type
  • 26cell line
  • 3in vitro differentiated cells
  • 2tissue
Organ
  • 19liver
  • 10blood
  • 10bodily fluid
  • 2connective tissue
  • 1epithelium
Project
  • 31AMP
Genome assembly (visualization)
  • 31hg19
  • 29GRCh38
Lab
  • 31AMP-T2D consortium
Audit category:
  • 3inconsistent control
Audit category:
  • 6missing controlled_by
Audit category:
  • 12inconsistent control read length
  • 8inconsistent control run_type
files.file_type!
  • bed broadPeak
BIOSAMPLE
ASSAY

31 results

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ChIP-seq
cell line
HepG216
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in vitro differentiated cells
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tissue
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