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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
81
accessible chromatin
73
gene expression
66
target gene predictions
63
candidate regulatory elements
45
chromatin state
45
differential activity
21
binding sites
21
eQTL
16
variant allelic effects
14
Fine-mapped variants
12
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
100
September, 2022
64
February, 2021
51
March, 2023
36
May, 2021
31
February, 2024
21
March, 2020
21
November, 2021
20
January, 2021
20
September, 2023
17
May, 2020
15
January, 2020
9
August, 2021
8
June, 2020
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
2
April, 2020
2
October, 2022
1
April, 2019
1
January, 2018
1
March, 2024
1
May, 2019
Available data
282
bed bed3+
123
tsv
80
bigWig
40
bed bed9
bigBed narrowPeak
10
bigBed bed9
3
bam
bed gappedPeak
3
csv
3
xls
Organism
464
Homo sapiens
Biosample type
223
primary cell
198
tissue
40
cell line
3
in vitro differentiated cells
Organ
942
epithelium
652
kidney
467
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
269
vasculature
260
pancreas
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
399
AMP
21
ENCODE
20
KPMP
20
T1D
2
LungMap
2
community
Genome assembly (visualization)
328
hg19
135
GRCh38
files.file_type!
bed gappedPeak
bigBed narrowPeak
BIOSAMPLE
TYPE
464 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
eQTL
variant allelic effects
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
4
6
5
2
1
pancreatic ductal cell
5
3
3
3
1
1
2
endothelial cell of hepatic sinusoid
6
4
6
pancreatic acinar cell
5
3
3
3
1
pancreatic beta cell
6
3
2
3
+ See 32 more…
tissue
islet of Langerhans
6
11
1
3
2
13
1
2
1
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
1
3
3
3
2
2
3
1
tibial artery
3
1
2
3
3
2
2
3
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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