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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
candidate regulatory elements
85
target gene predictions
68
accessible chromatin
52
chromatin state
50
gene expression
33
differential activity
23
binding sites
19
histone modifications
18
eQTL
8
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
142
September, 2022
96
February, 2021
47
March, 2023
38
May, 2021
28
November, 2021
20
January, 2021
17
February, 2024
12
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
October, 2022
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
Available data
324
bed bed3+
78
tsv
62
bigWig
47
bed bed9
bigBed narrowPeak
3
bam
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
464
Homo sapiens
Biosample type
209
primary cell
139
tissue
104
cell line
12
in vitro differentiated cells
Organ
942
epithelium
652
kidney
467
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
269
vasculature
260
pancreas
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
414
AMP
28
ENCODE
20
T1D
2
community
Genome assembly (visualization)
368
hg19
108
GRCh38
files.file_type!
bed gappedPeak
bigBed narrowPeak
BIOSAMPLE
TYPE
464 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
foreskin keratinocyte
11
4
4
pancreatic ductal cell
3
5
3
3
1
2
1
keratinocyte
3
5
2
3
1
2
1
foreskin fibroblast
6
2
1
1
4
2
pancreatic acinar cell
3
5
3
3
1
+ See 25 more…
tissue
islet of Langerhans
1
6
3
11
2
1
13
1
2
2
2
body of pancreas
8
5
4
2
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
7
4
4
lower leg skin
6
2
2
+ See 13 more…
cell line
EndoC_BH1
1
8
8
3
1
GM23248
2
1
1
1
1
1
Panc1
2
2
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
+ See 21 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
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