Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
170
candidate regulatory elements
124
target gene predictions
91
chromatin state
89
accessible chromatin
19
eQTL
18
variant allelic effects
15
gene expression
13
histone modifications
12
binding sites
2
Fine-mapped variants
2
caQTL
2
differential activity
2
sQTL
Date released
245
September, 2022
117
February, 2021
36
February, 2024
29
November, 2021
23
May, 2021
20
January, 2021
11
May, 2020
10
June, 2020
9
August, 2021
8
January, 2020
7
August, 2018
7
March, 2020
7
October, 2019
6
August, 2017
6
March, 2023
5
January, 2022
3
May, 2022
3
October, 2022
2
May, 2019
2
November, 2019
1
April, 2019
1
February, 2020
1
June, 2021
Available data
440
bed bed3+
tsv
84
bed bed9
73
bigWig
14
bigBed narrowPeak
5
bigBed bed9
3
bam
bed gappedPeak
3
csv
3
xls
Organism
559
Homo sapiens
Biosample type
389
tissue
126
primary cell
42
cell line
2
in vitro differentiated cells
Organ
632
epithelium
403
connective tissue
401
kidney
399
brain
361
musculature of body
310
lung
286
intestine
228
heart
227
limb
217
bodily fluid
206
blood
205
embryo
205
vasculature
202
skin of body
198
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
130
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
lymphatic vessel
19
nerve
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
508
AMP
29
ENCODE
20
T1D
2
community
Genome assembly (visualization)
538
hg19
145
GRCh38
files.file_type!
bed gappedPeak
tsv
BIOSAMPLE
TYPE
559 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
variant allelic effects
gene expression
histone modifications
binding sites
Fine-mapped variants
caQTL
differential activity
sQTL
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
islet of Langerhans
1
3
6
13
1
2
1
2
2
2
pancreas
5
5
3
5
1
1
1
1
+ See 25 more…
primary cell
pancreatic ductal cell
3
6
1
1
2
1
skeletal muscle satellite cell
2
2
2
5
2
pancreatic beta cell
3
7
1
1
pancreatic acinar cell
3
6
1
1
pancreatic alpha cell
3
6
1
1
+ See 15 more…
cell line
EndoC_BH1
1
8
1
2
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
Panc1
2
2
1
SJCRH30
2
1
1
1
+ See 4 more…
in vitro differentiated cells
myotube
1
1
See all biosamples
Download