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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
152
target gene predictions
116
candidate regulatory elements
100
accessible chromatin
70
gene expression
68
chromatin state
35
differential activity
32
binding sites
28
histone modifications
20
eQTL
15
variant allelic effects
11
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
185
September, 2022
135
February, 2021
76
February, 2024
47
March, 2023
42
May, 2021
22
January, 2021
22
June, 2020
21
November, 2021
16
August, 2021
16
March, 2020
12
May, 2020
8
January, 2020
7
August, 2018
7
January, 2022
6
February, 2020
6
October, 2019
5
September, 2023
4
August, 2017
4
February, 2023
4
November, 2019
3
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
May, 2019
1
May, 2022
Available data
453
bed bed3+
106
tsv
78
bigWig
62
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
bed gappedPeak
3
csv
3
xls
1
bed bed9+
Organism
653
Homo sapiens
Biosample type
218
cell line
213
tissue
188
primary cell
33
in vitro differentiated cells
1
stem cell
Organ
946
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
274
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
603
AMP
22
T1D
21
ENCODE
5
KPMP
2
community
Genome assembly (visualization)
533
hg19
192
GRCh38
files.file_type!
bed gappedPeak
BIOSAMPLE
TYPE
653 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
variant to gene
cell line
H1-hESC
39
1
1
8
1
2
1
EndoC_BH1
1
8
8
3
1
H9
8
7
1
MG63
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
+ See 32 more…
tissue
islet of Langerhans
1
6
11
3
2
1
13
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
3
1
3
2
2
3
1
tibial artery
2
3
3
1
3
2
2
3
+ See 28 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
trophoblast cell
5
7
1
4
1
pancreatic beta cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic alpha cell
3
6
3
3
1
+ See 28 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
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