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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
gene expression
246
target gene predictions
231
candidate regulatory elements
224
accessible chromatin
115
chromatin state
92
differential activity
53
binding sites
41
variant allelic effects
36
histone modifications
7
eQTL
2
caQTL
Date released
321
September, 2022
275
February, 2021
155
September, 2023
133
November, 2021
130
February, 2024
42
May, 2021
38
March, 2023
37
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
8
March, 2020
8
October, 2022
7
April, 2020
7
August, 2017
7
March, 2024
6
August, 2018
5
October, 2019
4
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
839
bed bed3+
329
tsv
179
bigWig
108
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1305
Homo sapiens
Biosample type
835
primary cell
305
tissue
139
cell line
26
in vitro differentiated cells
Organ
956
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
274
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
988
AMP
155
KPMP
133
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
947
hg19
365
GRCh38
files.file_type!
bed gappedPeak
BIOSAMPLE
TYPE
1305 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
3
15
2
2
1
1
2
hepatocyte
13
3
2
8
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
1
2
2
1
1
endothelial cell of umbilical vein
4
6
2
5
2
1
+ See 149 more…
tissue
small intestine
17
29
1
15
1
large intestine
14
27
1
13
1
sigmoid colon
7
10
1
5
pigmented layer of retina
20
transverse colon
5
8
1
4
1
+ See 38 more…
cell line
HeLa-S3
55
5
3
1
EndoC_BH1
8
1
8
3
1
HT-29
2
2
1
1
1
1
SW480
1
2
1
1
1
1
HCT116
3
2
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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