Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
71
accessible chromatin
50
target gene predictions
49
gene expression
33
differential activity
31
candidate regulatory elements
22
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
56
September, 2022
47
March, 2023
41
February, 2021
33
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
10
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
June, 2020
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
181
bed bed3+
77
tsv
65
bigWig
18
bed bed9
14
bigBed narrowPeak
3
bam
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
302
Homo sapiens
Biosample type
142
tissue
123
primary cell
34
cell line
3
in vitro differentiated cells
Organ
956
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
274
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
262
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
210
hg19
74
GRCh38
files.file_type!
bed gappedPeak
BIOSAMPLE
TYPE
302 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
1
2
2
2
2
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
urinary bladder
1
2
3
2
+ See 20 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic alpha cell
6
3
3
3
1
pancreatic delta cell
4
4
3
3
1
+ See 12 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download