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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
4
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
4
DNA accessibility
Date released
142
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
66
bam
58
bigWig
58
tsv
bed narrowPeak
4
bed bed3
Organism
151
Homo sapiens
Biosample type
150
tissue
1
primary cell
Organ
558
connective tissue
441
adipose tissue
405
pancreas
252
liver
199
heart
193
epithelium
171
kidney
151
bone element
98
vasculature
97
blood vessel
65
artery
64
brain
32
musculature of body
27
eye
27
limb
20
lung
15
nerve
embryo
9
blood
9
bodily fluid
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Project
150
AMP
1
T1D
Genome assembly (visualization)
62
hg19
58
GRCh38
Lab
150
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bed narrowPeak
fastq
month_released!
February, 2020
organ_slims!
embryo
BIOSAMPLE
ASSAY
151 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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primary cell
megakaryocyte
1
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