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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
single cell RNA-seq
22
total RNA-seq
18
ChIP-seq
1
pCHi-C
Assay category
45
Transcription
18
DNA binding
Target of assay
18
control
Date released
38
September, 2020
10
October, 2018
6
May, 2022
4
December, 2018
2
December, 2017
1
August, 2018
1
July, 2018
1
November, 2017
1
November, 2018
Available data
152
fastq
113
bam
bed narrowPeak
71
bigWig
67
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
6
txt
1
bedpe bed3+
1
tsv
1
zippedFastqFolder
Organism
64
Homo sapiens
Biosample type
39
primary cell
22
tissue
2
cell line
1
in vitro differentiated cells
Organ
27
pancreas
17
epithelium
7
adipose tissue
7
connective tissue
4
spleen
3
liver
1
blood
1
bodily fluid
Project
38
HPAP
26
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
38
Klaus Kaestner, Upenn
20
AMP-T2D consortium
6
Kyle Gaulton, UCSD
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
64 results
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single cell RNA-seq
total RNA-seq
ChIP-seq
pCHi-C
primary cell
Langerhans cell
22
pancreatic alpha cell
1
15
pancreatic beta cell
1
tissue
islet of Langerhans
6
body of pancreas
4
spleen
4
omental fat pad
3
subcutaneous adipose tissue
3
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cell line
GM12878
1
HepG2
1
in vitro differentiated cells
white fat cell
1
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