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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 37total RNA-seq
  • 33ChIP-seq
  • 28single cell RNA-seq
  • 11WGBS
Assay category
  • 65Transcription
  • 33DNA binding
  • 11DNA methylation
Target of assay
  • 26control
  • 7transcription factor
Date released
  • 18September, 2020
  • 17April, 2018
  • 15February, 2018
  • 14October, 2018
  • 11August, 2017
  • 8July, 2018
  • 6February, 2021
  • 6May, 2022
  • 4December, 2018
  • 4November, 2017
  • 3November, 2018
  • 2December, 2017
  • 1June, 2018
Available data
  • 233fastq
  • 209bam
  • 159bigWig
  • bed narrowPeak
  • 102bigBed narrowPeak
  • 47tsv
  • 6txt
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bed bed3+
  • 2zippedFastqFolder
Organism
  • 109Homo sapiens
Biosample type
  • 50primary cell
  • 38tissue
  • 15in vitro differentiated cells
  • 6cell line
Organ
  • 52pancreas
  • 40epithelium
  • 19adipose tissue
  • 19connective tissue
  • 7liver
  • 4embryo
  • 4spleen
  • 2blood
  • 2bodily fluid
Project
  • 85AMP
  • 24HPAP
Genome assembly (visualization)
  • 51GRCh38
  • 48hg19
Lab
  • 79AMP-T2D consortium
  • 24Klaus Kaestner, Upenn
  • 6Kyle Gaulton, UCSD
Audit category:
  • 7missing controlled_by
files.file_type!
  • bed narrowPeak
BIOSAMPLE
ASSAY

109 results

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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
WGBS
primary cell
pancreatic alpha cell1546
pancreatic beta cell14
mesenchymal cell4
pancreatic cell4
pancreatic delta cell3
tissue
white adipose tissue7
islet of Langerhans6
subcutaneous adipose tissue6
body of pancreas5
spleen4
in vitro differentiated cells
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
endocrine cell2
posterior foregut2
cell line
HepG24
GM128782
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