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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
total RNA-seq
8
ChIP-seq
1
GRO-seq
Assay category
12
Transcription
8
DNA binding
Target of assay
7
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
August, 2021
7
February, 2018
5
December, 2017
May, 2021
1
January, 2018
Available data
34
bam
27
bigWig
27
fastq
bed narrowPeak
12
tsv
3
bed bed3+
Organism
21
Homo sapiens
Biosample type
13
in vitro differentiated cells
8
cell line
Organ
605
connective tissue
478
adipose tissue
472
pancreas
313
liver
199
heart
192
epithelium
150
bone element
103
vasculature
101
blood vessel
83
brain
67
artery
44
kidney
36
musculature of body
30
limb
28
eye
21
embryo
16
nerve
11
spleen
9
vein
8
skeleton
7
blood
7
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
21
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
1
hg18
Lab
21
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bed narrowPeak
month_released!
May, 2021
BIOSAMPLE
ASSAY
21 results
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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
6
1
Hepatic endoderm
2
cell line
H1-hESC
8
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