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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
single cell RNA-seq
49
total RNA-seq
11
ATAC-seq
6
snATAC-seq
1
Hi-C
Assay category
107
Transcription
17
DNA accessibility
1
3D chromatin structure
Date released
64
August, 2021
47
September, 2023
14
May, 2023
Available data
bed narrowPeak
64
xls
57
txt
1
hic
Organism
125
Homo sapiens
Biosample type
125
tissue
Organ
125
kidney
Project
78
AMP
47
KPMP
Genome assembly (visualization)
11
GRCh38
1
hg19
Lab
2369
AMP-T2D consortium
324
Klaus Kaestner, Upenn
211
Kyle Gaulton, UCSD
78
Katalin Susztak, Upenn
47
KPMP
24
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
3
Struan F.A. Grant, CHOP
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
files.file_type!
bed narrowPeak
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
125 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
snATAC-seq
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tissue
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58
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